PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00034.1.g03960.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 241aa    MW: 27176.8 Da    PI: 7.5324
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00034.1.g03960.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.14.5e-1441682855
                         G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55
                                     Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Zjn_sc00034.1.g03960.1.sm.mkhc 41 GPKKILDLMNVPGLTRENVASHLQKYRL 68
                                    6**************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521725.12E-51238IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23009.0E-61238No hitNo description
SuperFamilySSF466894.3E-83172IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-143973IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-114068IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MALFDATAFP YGLRVLVVDD DPTWLKILEK MLRKCSYEEG GPKKILDLMN VPGLTRENVA  60
SHLQKYRLYL SRLQKQNDER MMRAIRQDLS HKGPSDNLNL GSSFQEQPGD VTNRFQHGSQ  120
KIQAQANMLD SHIEDKKVPD KNRTLVSGVT DSQNVTGASP LGGLLSFERK PVNQDRKQSD  180
TRILDCQSWR GNVAPKQFMQ CPKHNHEHCD LTGDYSCLPK LDSELSTAPG HLYAPSPCDL  240
D
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458941.11e-100hypothetical protein SORBIDRAFT_03g043080
SwissprotQ5N6V84e-95ORR26_ORYSJ; Two-component response regulator ORR26
TrEMBLC5XFH11e-100C5XFH1_SORBI; Putative uncharacterized protein Sb03g043080
STRINGSb03g043080.11e-99(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59003752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.14e-16response regulator 11